The detailed information of tRNA gene sequence


Sequence ID>SRA1013697
Genome IDSRR023396.395612
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 215
End posion on genome 139
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
accgtcccaa
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTTAGAGCACGGTCCTGATAAGACCGGGGTCTGTGGTTCGAG
TCCACAATGGCCCACCA
Downstream region at tRNA end position 
taatgtacaa
Secondary structure (Cloverleaf model)
>SRA1013697	Ile	GAT
                   a      ACCA taatgtacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     A C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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