The detailed information of tRNA gene sequence


Sequence ID>SRA1013699
Genome IDSRR023396.395746
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 130
End posion on genome 53
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aatgagtaga
tRNA gene sequence 
GCGCCTGTAGCTCAGTATGGATAGAGCGAGGGATTCCTAATCCCTAGGTCGCCGGTTCGA
ATCCGGCCAGGCGCCCCA
Downstream region at tRNA end position 
ttcctaattc
Secondary structure (Cloverleaf model)
>SRA1013699	Arg	CCT
                   a      CCCA ttcctaattc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    A T G A        A      | | | | |     G
  T         C T C G       G C C G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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