The detailed information of tRNA gene sequence


Sequence ID>SRA1013710
Genome IDSRR023396.408263
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 206
End posion on genome 131
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aattgtttat
tRNA gene sequence 
GCCCATGTAGCTCAGTTGGTAGAGCACGTCCTTGGTAAGGACGGGGTCACCGGTTCAATT
CCGGTCGTGGGCTCCA
Downstream region at tRNA end position 
ggggataaaa
Secondary structure (Cloverleaf model)
>SRA1013710	Thr	GGT
                   t      TCCA ggggataaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     G - C          T T
                    T     T G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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