The detailed information of tRNA gene sequence


Sequence ID>SRA1013717
Genome IDSRR023396.421473
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 253
End posion on genome 177
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaccgtccaa
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTTAGAGCACGGTCCTGATAANACCGGGGTCTGTGGTTCGAG
TCCACAATGGCCCACCA
Downstream region at tRNA end position 
taatgtacaa
Secondary structure (Cloverleaf model)
>SRA1013717	Ile	GAT
                   a      ACCA taatgtacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     A C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    T - A
                    C   N
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK