The detailed information of tRNA gene sequence


Sequence ID>SRA1013727
Genome IDSRR023396.438419
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 173
End posion on genome 251
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ccttttcatG
tRNA gene sequence 
GTGAGCGTAGCTCAACTGGTTAGAGCATCGGACTGTGGATCCGAAGGTTGGGGGTTCGAG
ACCCCTCGCTCCACCCC
Downstream region at tRNA end position 
Accctaaacc
Secondary structure (Cloverleaf model)
>SRA1013727	His	GTG
                   G      CCCC Accctaaacc
                     G   A
                     T   C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          A G
                    T     T C C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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