The detailed information of tRNA gene sequence


Sequence ID>SRA1013730
Genome IDSRR023396.443156
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 140
End posion on genome 214
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcattagaac
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTTAGCGCACAGCGTTCGGGACGCTGGGGTCAGGGGTTCGA
ATCCCCTCGCCCCGAttt
Downstream region at tRNA end position 
tttcttttat
Secondary structure (Cloverleaf model)
>SRA1013730	Pro	CGG
                   c      Attt tttcttttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     G
  T         C G C G       A G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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