The detailed information of tRNA gene sequence


Sequence ID>SRA1013732
Genome IDSRR023396.446006
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 105
End posion on genome 177
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cccactccaa
tRNA gene sequence 
GCGCCTATAGCTCAGCGGACAGAGCATCGGTCTTCGGAACCGAGGGTCGTGGGTTCGAAT
CCCTCTAGGCGCGtat
Downstream region at tRNA end position 
ctaaatcatc
Secondary structure (Cloverleaf model)
>SRA1013732	Arg	TCG
                   a      Gtat ctaaatcatc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     C T C C C     A
      C G A        A      |   | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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