The detailed information of tRNA gene sequence


Sequence ID>SRA1013738
Genome IDSRR023396.462435
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 31
End posion on genome 106
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
tcataagaac
tRNA gene sequence
CGGGGCGTAGCGCAGCCTGGTTAGCGCACAGCGTTCGGGACGCTGGGGTCAGGGGTTCGA
ATCCCCTCGCCCCGACtt
Downstream region at tRNA end position
aatcattttg
Secondary structure (Cloverleaf model)
>SRA1013738	Pro	CGG
                   c      ACtt aatcattttg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C C G A        A      | | | | |     G
  T         C G C G       A G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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