The detailed information of tRNA gene sequence


Sequence ID>SRA1013741
Genome IDSRR023396.465391
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 151
End posion on genome 77
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
tatcaacaaa
tRNA gene sequence
GCTCCCGTCGTCTAGTCCGGTCAAGGATATCGGCCTTTCGAGCCGCAGGCACGGGTTCAA
ATCCCGTCGGGAGCAttt
Downstream region at tRNA end position
ttgtaaattg
Secondary structure (Cloverleaf model)
>SRA1013741	Glu	TTC
                   a      Attt ttgtaaattg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C T G A        C      | | | | |     A
  C         T C T G       A C G G G     C
  G         + | | +                 T T
  G         G G A T
    T C A A        A     AGGC
                    T   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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