The detailed information of tRNA gene sequence


Sequence ID>SRA1013747
Genome IDSRR023396.470466
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 88
End posion on genome 163
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
gtatgggttt
tRNA gene sequence
GGGCGGGTAGATCAGCCTGGAATGATCGCGACGTTGGCATCGTCGAGGTCCGGGGTTCAA
ATCCCCGCCCGTCCACtg
Downstream region at tRNA end position
aactttttcc
Secondary structure (Cloverleaf model)
>SRA1013747	Ala	GGC
                   t      ACtg aactttttcc
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         C T A G       C G G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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