The detailed information of tRNA gene sequence


Sequence ID>SRA1013760
Genome IDSRR023396.495440
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 134
End posion on genome 209
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggcctcttat
tRNA gene sequence 
GCGCCCGTAGCTCAATGGATAGAGCAGGGGCTTCCTAAGCCCTTGGTTGGAAGTTCGACT
CTTCTCGGGCGTACCT
Downstream region at tRNA end position 
atttttataa
Secondary structure (Cloverleaf model)
>SRA1013760	Arg	CCT
                   t      ACCT atttttataa
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T C T T C     A
      T A A        A      + | | | |     G
    G       C T C G       G G A A G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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