The detailed information of tRNA gene sequence


Sequence ID>SRA1013762
Genome IDSRR023396.501716
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 219
End posion on genome 132
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ggtttttttg
tRNA gene sequence
GTAGAGGTGTCGGAGTGGCTTATCGAGCAGCCTTGGAAAGGCTGTGTAGGGCATGTCCCT
ACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position
gcgggacgag
Secondary structure (Cloverleaf model)
>SRA1013762	Ser	GGA
                   g      Gttt gcgggacgag
                     G - C
                     T   C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G C T       G C G G G     C
    G       + | | |                 T T
    C       T C G A
      T T A        G     TGTAGGGCATGTCCCTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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