The detailed information of tRNA gene sequence


Sequence ID>SRA1013879
Genome IDSRR023774.230041
Search identical group
Phylum/ClassTampa Bay phage from induction experiment (SRP001112)
Species
Start position on genome 2
End posion on genome 76
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGCCCGTTAGCCAAGTGGAAAGGTTGCTGTCTGCAAAACAGCTATGCGAGGGTTCGATTC
CCTCACGGGCTTCCA
Downstream region at tRNA end position 
attaggttac
Secondary structure (Cloverleaf model)
>SRA1013879	Cys	GCA
                   t      TCCA attaggttac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C T C C C     A
        G A        A      | | | | |     G
      T     A C C G       G A G G G     C
      G       | | +                 T T
      G     A G G T
        A A        T     TATGC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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