The detailed information of tRNA gene sequence


Sequence ID>SRA1013975
Genome IDSRR023821.16658
Search identical group
Phylum/ClassPru Toh Daeng peat swamp (SRP001114)
Species
Start position on genome 290
End posion on genome 215
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnntattttt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGAGA
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tgataaggta
Secondary structure (Cloverleaf model)
>SRA1013975	Trp	CCA
                   t      GCCA tgataaggta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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