The detailed information of tRNA gene sequence


Sequence ID>SRA1013988
Genome IDSRR023821.25056
Search identical group
Phylum/ClassPru Toh Daeng peat swamp (SRP001114)
Species
Start position on genome 72
End posion on genome 147
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacggataac
tRNA gene sequence 
GGGCCTGTAGCTCAGCGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGGGGGTTCAAAT
CCCTCCGGGCCCACCA
Downstream region at tRNA end position 
ccgctagcct
Secondary structure (Cloverleaf model)
>SRA1013988	Met	CAT
                   c      ACCA ccgctagcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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