The detailed information of tRNA gene sequence


Sequence ID>SRA1014114
Genome IDSRR023845.5168
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 224
End posion on genome 149
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnntgcgttt
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCATCGGTTCGATC
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
ttttgcagga
Secondary structure (Cloverleaf model)
>SRA1014114	Ala	TGC
                   t      ACCA ttttgcagga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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