The detailed information of tRNA gene sequence


Sequence ID>SRA1014115
Genome IDSRR023845.5490
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 143
End posion on genome 228
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tcctgttccT
tRNA gene sequence 
GGGTCGATGCCCGAGCGGTTAATGGGGACGGACTGTAAATTCGTTGGCAATATGTCTACG
CTGGTTCAAATCCAGCTCGGCCCAAta
Downstream region at tRNA end position 
atttgccaat
Secondary structure (Cloverleaf model)
>SRA1014115	Tyr	GTA
                   T      AAta atttgccaat
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C T G G     C
    G       + | | |                 T T
    T       T G G G
      T A A        G     TGGCAATATGTCTAC
                    A - T
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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