The detailed information of tRNA gene sequence


Sequence ID>SRA1014127
Genome IDSRR023845.9945
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 226
End posion on genome 151
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gctccgacca
tRNA gene sequence 
GCGCCCTTCGTCTAGCGGTCCAGGACGTCGCCCTTTCACGGCGAAAACACGGGTTCGATT
CCCGTAGGGCGCGCCA
Downstream region at tRNA end position 
acaaaatcaa
Secondary structure (Cloverleaf model)
>SRA1014127	Glu	TTC
                   a      GCCA acaaaatcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C C A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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