The detailed information of tRNA gene sequence


Sequence ID>SRA1014141
Genome IDSRR023845.16132
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 15
End posion on genome 91
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgtaaggaa
tRNA gene sequence 
CGGAGTGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGAGTTCGAA
TCTCTCCACTCCGACCA
Downstream region at tRNA end position 
ttgccttcaa
Secondary structure (Cloverleaf model)
>SRA1014141	Pro	TGG
                   a      ACCA ttgccttcaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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