The detailed information of tRNA gene sequence


Sequence ID>SRA1014162
Genome IDSRR023845.22748
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 27
End posion on genome 98
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aattagttta
tRNA gene sequence
AATGATGTAGTTTAATGGTAGAGCGTGGGAATCATAATCCTAATGTTGTAGGTTCAAATC
CTATCATCATTAtaa
Downstream region at tRNA end position
atttnnnnnn
Secondary structure (Cloverleaf model)
>SRA1014162	Met	CAT
                   a      Ataa atttnnnnnn
                     A - T
                     A - T
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T A T C C     A
        A A        A      + | | | |     A
      T     T T T G       G T A G G     C
      G     + | + |                 T T
      G     G A G C
        T A        G     ATGTT
                    T - A
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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