The detailed information of tRNA gene sequence


Sequence ID>SRA1014167
Genome IDSRR023845.23735
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 188
End posion on genome 112
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgcggtaaac
tRNA gene sequence 
GGTTTGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCAGACCGCAA
Downstream region at tRNA end position 
ccgttgtaaa
Secondary structure (Cloverleaf model)
>SRA1014167	Asp	GTC
                   c      GCAA ccgttgtaaa
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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