The detailed information of tRNA gene sequence


Sequence ID>SRA1014193
Genome IDSRR023845.34102
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 11
End posion on genome 87
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tagcgggtgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCTAGGCCCACCA
Downstream region at tRNA end position 
cacacaaatg
Secondary structure (Cloverleaf model)
>SRA1014193	Ile	GAT
                   t      ACCA cacacaaatg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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