The detailed information of tRNA gene sequence


Sequence ID>SRA1014198
Genome IDSRR023845.35829
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 85
End posion on genome 13
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gagaaggtgc
tRNA gene sequence 
TCCCAAATAGTCTAGGCGGTTAGGATACGTGGCTTTCACCCACGCGACCCGGGTTCGAGT
CCCGGTTTGGGAAttt
Downstream region at tRNA end position 
tgctttttan
Secondary structure (Cloverleaf model)
>SRA1014198	Glu	TTC
                   c      Attt tgctttttan
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T G
                    T     G G C C C     A
      G G A        A      | | | | |     G
    C       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     CGAC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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