The detailed information of tRNA gene sequence


Sequence ID>SRA1014200
Genome IDSRR023845.36526
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 273
End posion on genome 197
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGAA
TCTACCCGGGCCCACCA
Downstream region at tRNA end position 
tgcgtcttcg
Secondary structure (Cloverleaf model)
>SRA1014200	Ile	GAT
                   c      ACCA tgcgtcttcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C A T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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