The detailed information of tRNA gene sequence


Sequence ID>SRA1014218
Genome IDSRR023845.43437
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 29
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tgcgaagtgt
tRNA gene sequence
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position
acgttatcca
Secondary structure (Cloverleaf model)
>SRA1014218	Met	CAT
                   t      ACCA acgttatcca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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