The detailed information of tRNA gene sequence


Sequence ID>SRA1014222
Genome IDSRR023845.44619
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 237
End posion on genome 162
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cctcggacac
tRNA gene sequence 
GGCCCCATCGTTTAGTGGCCTAGGACACCGCCCTTTCACGGCGGCAGCACGGGTTCGAAT
CCCGTTGGGGTCACCA
Downstream region at tRNA end position 
gcgccgagca
Secondary structure (Cloverleaf model)
>SRA1014222	Glu	TTC
                   c      ACCA gcgccgagca
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T T T G       A C G G G     C
    G       + + | |                 T T
    C       G G A C
      C T A        A     CAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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