The detailed information of tRNA gene sequence


Sequence ID>SRA1014228
Genome IDSRR023845.46442
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 83
End posion on genome 10
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgccgatcct
tRNA gene sequence 
GCCCCCTTAGCTCAGTCGGTAGAGCGTTTCCATGGTAAGGAAAAGGTCAACGGTTCGATT
CCGTTAGGGGGCTCgc
Downstream region at tRNA end position 
gggaccannn
Secondary structure (Cloverleaf model)
>SRA1014228	Thr	GGT
                   t      TCgc gggaccannn
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T T G C C     A
      T G A        A      | | | | |     G
    C       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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