The detailed information of tRNA gene sequence


Sequence ID>SRA1014243
Genome IDSRR023845.52182
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 241
End posion on genome 165
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
nnnnnnnnnc
tRNA gene sequence
GCGCCCGTAGCTCAGTTGGATAGAGCAAGGAGCTTCTACCTCCTCGGTCGGGGGTTCGAC
TCCCTCCGGGCGCGCCA
Downstream region at tRNA end position
atcgcttcac
Secondary structure (Cloverleaf model)
>SRA1014243	Arg	TCT
                   c      GCCA atcgcttcac
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    G - C
                    G - C
                    A - T
                    G - C
                  C       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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