The detailed information of tRNA gene sequence


Sequence ID>SRA1014246
Genome IDSRR023845.54039
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 195
End posion on genome 121
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcccgcagat
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGTCGCCCTCTCACGGCGAAAACACGAGTTCGATTC
TCGTAGGGGTCACCA
Downstream region at tRNA end position 
gtcaagcacg
Secondary structure (Cloverleaf model)
>SRA1014246	Glu	CTC
                   t      ACCA gtcaagcacg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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