The detailed information of tRNA gene sequence


Sequence ID>SRA1014253
Genome IDSRR023845.59977
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 284
End posion on genome 192
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnncgt
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCGGTTTGCTAAACCGCCGTACCGGGTTTACTG
GTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
acaaattcgt
Secondary structure (Cloverleaf model)
>SRA1014253	Ser	GCT
                   t      GCCA acaaattcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACCGGGTTTACTGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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