The detailed information of tRNA gene sequence


Sequence ID>SRA1014269
Genome IDSRR023845.66798
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 109
End posion on genome 33
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgctgtttca
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tcgtttaggt
Secondary structure (Cloverleaf model)
>SRA1014269	Asp	GTC
                   a      GCCA tcgtttaggt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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