The detailed information of tRNA gene sequence


Sequence ID>SRA1014289
Genome IDSRR023845.72150
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 158
End posion on genome 230
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gagaaggtgc
tRNA gene sequence 
TCCCAAATAGTCTAGGCGGTTAGGATACGTGGCTTTCACCCACGCGACCCGGGTTCGAGT
CCCGGTTTGGGAAttt
Downstream region at tRNA end position 
tgctttttcg
Secondary structure (Cloverleaf model)
>SRA1014289	Glu	TTC
                   c      Attt tgctttttcg
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T G
                    T     G G C C C     A
      G G A        A      | | | | |     G
    C       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     CGAC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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