The detailed information of tRNA gene sequence


Sequence ID>SRA1014298
Genome IDSRR023845.79410
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 21
End posion on genome 110
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgtcgtcag
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACCGGTCTTGAAAACCGGCGAACGGGCAACCGTT
CCGTGGGTTCGAATCCCACCTCTTCCGCCC
Downstream region at tRNA end position 
agagctgatt
Secondary structure (Cloverleaf model)
>SRA1014298	Ser	TGA
                   g      GCCC agagctgatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGAACGGGCAACCGTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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