The detailed information of tRNA gene sequence


Sequence ID>SRA1014318
Genome IDSRR023845.87668
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 167
End posion on genome 243
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgctgcgcct
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTCAGAGCGCCGGTCTCCAAAACCGGAGGTTGCGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
tatggcaccg
Secondary structure (Cloverleaf model)
>SRA1014318	Trp	CCA
                   t      GCCA tatggcaccg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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