The detailed information of tRNA gene sequence


Sequence ID>SRA1014321
Genome IDSRR023845.87972
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 86
End posion on genome 164
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcacacatac
tRNA gene sequence 
CCCCGCGTGGCCTAGTCCGGTTTAGGGCAACACCTTGTCACGGTGGAGATCGCCAGTTCA
AATCTGGTCGCGGGGGCCA
Downstream region at tRNA end position 
tcattaacga
Secondary structure (Cloverleaf model)
>SRA1014321	Asp	GTC
                   c      GCCA tcattaacga
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T G G T C     A
    C T G A        G      + | | | |     A
  C         T C C G       G C C A G     C
  G         + | | |                 T T
  G         G G G C
    T T T A        A     AGATC
                    A   G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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