The detailed information of tRNA gene sequence


Sequence ID>SRA1014322
Genome IDSRR023845.88140
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 147
End posion on genome 72
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgccggtg
tRNA gene sequence 
GGGCCTGTAGCTCAACGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGATT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
acctttccaa
Secondary structure (Cloverleaf model)
>SRA1014322	Met	CAT
                   g      ACCA acctttccaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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