The detailed information of tRNA gene sequence


Sequence ID>SRA1014338
Genome IDSRR023845.95624
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 44
End posion on genome 133
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgtcttgtc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAAACGGGAAACCGTT
TCGTGGGTTCGAATCCCATCTTCTCCGCCA
Downstream region at tRNA end position 
tcgcagctgc
Secondary structure (Cloverleaf model)
>SRA1014338	Ser	GCT
                   c      GCCA tcgcagctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAACGGGAAACCGTTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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