The detailed information of tRNA gene sequence


Sequence ID>SRA1014348
Genome IDSRR023845.98686
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 152
End posion on genome 76
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagcaagttt
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCAAG
TCCGGTCAGGGTCGCCA
Downstream region at tRNA end position 
aggcgagttc
Secondary structure (Cloverleaf model)
>SRA1014348	Asp	GTC
                   t      GCCA aggcgagttc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C C G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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