The detailed information of tRNA gene sequence


Sequence ID>SRA1014360
Genome IDSRR023845.103988
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 129
End posion on genome 205
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tccgcgcagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCATTTGTCTGGGGGACAAAGGGTCGCAGGTTCAAA
TCCTGTCGCTCCGACCA
Downstream region at tRNA end position 
ttttcactaa
Secondary structure (Cloverleaf model)
>SRA1014360	Pro	GGG
                   t      ACCA ttttcactaa
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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