The detailed information of tRNA gene sequence


Sequence ID>SRA1014369
Genome IDSRR023845.109230
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 188
End posion on genome 263
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatgccggtg
tRNA gene sequence 
GGGCCTGTAGCTCAACGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGATT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
acttccagaa
Secondary structure (Cloverleaf model)
>SRA1014369	Met	CAT
                   g      ACCA acttccagaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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