The detailed information of tRNA gene sequence


Sequence ID>SRA1014371
Genome IDSRR023845.110296
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 126
End posion on genome 55
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ntggttcgac
tRNA gene sequence 
GCGCGGGTAGCTCAGTGGTAGAGCGTTCGATTGCAGCTCGAAGGGTCACTGGTTCAATCC
CGGTCCCGCGCTtct
Downstream region at tRNA end position 
tgttcttgtc
Secondary structure (Cloverleaf model)
>SRA1014371	Cys	GCA
                   c      Ttct tgttcttgtc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          C T
                    T     T G G C C     A
        G A        A      | | + | |     A
      T     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  T       C
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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