The detailed information of tRNA gene sequence


Sequence ID>SRA1014377
Genome IDSRR023845.113961
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 121
End posion on genome 47
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position
gccctccggc
tRNA gene sequence
GGGCGTGTAGCTCAGTGGTAGAGCACTGTGTTGACATCGCAGGGGTCGCAAGTTCAATCC
TTGCCACGCCCACCA
Downstream region at tRNA end position
ttgaaaaccc
Secondary structure (Cloverleaf model)
>SRA1014377	Val	GAC
                   c      ACCA ttgaaaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     C G T T C     A
        G A        A      | | | | |     A
      T     C T C G       G C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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