The detailed information of tRNA gene sequence


Sequence ID>SRA1014396
Genome IDSRR023845.120176
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 73
End posion on genome 162
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtcggcgcc
tRNA gene sequence 
GGAGACGTGGGTGAGCGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ggccgtcctg
Secondary structure (Cloverleaf model)
>SRA1014396	Ser	GCT
                   c      GCCA ggccgtcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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