The detailed information of tRNA gene sequence


Sequence ID>SRA1014426
Genome IDSRR023845.134149
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 188
End posion on genome 263
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agtttctcgg
tRNA gene sequence 
GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCTTTACACGGCGTAGGTCGGGGGTTCGAGC
CCCTCAGCACCCACCA
Downstream region at tRNA end position 
ccccggccaa
Secondary structure (Cloverleaf model)
>SRA1014426	Val	TAC
                   g      ACCA ccccggccaa
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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