The detailed information of tRNA gene sequence


Sequence ID>SRA1014436
Genome IDSRR023845.142634
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 185
End posion on genome 258
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
gtttagtgtT
tRNA gene sequence
GGGGGAATAGCTCAGTGGTAGAGCGCTGGATTCCAGTCCCAGCGGTCGGGGGTTCGATCC
CCTCTTCCCTCATtt
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1014436	Trp	CCA
                   T      ATtt nnnnnnnnnn
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C T
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     CGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A   C
                  T       T
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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