The detailed information of tRNA gene sequence


Sequence ID>SRA1014437
Genome IDSRR023845.143406
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 52
End posion on genome 145
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgctgcagcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCCAGCGGTTTGCTAAACCGCCGTACCGGGTTTACT
GGTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
atatctgcca
Secondary structure (Cloverleaf model)
>SRA1014437	Ser	GCT
                   c      GCCA atatctgcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    G T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  C             | |                 T T
  T         A C C C
    G A A          A     CGTACCGGGTTTACTGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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