The detailed information of tRNA gene sequence


Sequence ID>SRA1014450
Genome IDSRR023845.146453
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 239
End posion on genome 163
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnncgggtgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCTAGGCCCACCA
Downstream region at tRNA end position 
cacacaagtg
Secondary structure (Cloverleaf model)
>SRA1014450	Ile	GAT
                   t      ACCA cacacaagtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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