The detailed information of tRNA gene sequence


Sequence ID>SRA1014464
Genome IDSRR023845.151084
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 243
End posion on genome 168
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tataaagcgc
tRNA gene sequence
GGGCCTGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGCAGGTTCGAGT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position
tactccttct
Secondary structure (Cloverleaf model)
>SRA1014464	Met	CAT
                   c      ACCA tactccttct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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