The detailed information of tRNA gene sequence


Sequence ID>SRA1014465
Genome IDSRR023845.151193
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 90
End posion on genome 14
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggtgactt
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCAGAGGAATCATAATCCTCGTGTCGGGGGTTCGAG
TCCCTCTCCCGCTACCA
Downstream region at tRNA end position 
aagaattcaa
Secondary structure (Cloverleaf model)
>SRA1014465	Met	CAT
                   t      ACCA aagaattcaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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