The detailed information of tRNA gene sequence


Sequence ID>SRA1014474
Genome IDSRR023845.156128
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 127
End posion on genome 53
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
atccgaatac
tRNA gene sequence
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACtt
Downstream region at tRNA end position
ggttcgccag
Secondary structure (Cloverleaf model)
>SRA1014474	Ile	GAT
                   c      ACtt ggttcgccag
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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